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1.
J Org Chem ; 66(22): 7342-54, 2001 Nov 02.
Artigo em Inglês | MEDLINE | ID: mdl-11681947

RESUMO

Chlorin building blocks incorporating a geminal dimethyl group in the reduced ring and synthetic handles in specific patterns at the perimeter of the macrocycle are expected to have utility in biomimetic and materials chemistry. A prior route employed condensation of a dihydrodipyrrin (Western half) and a bromodipyrromethane-monocarbinol (Eastern half), followed by oxidative cyclization of the putative dihydrobilene-a to form the meso-substituted zinc chlorin in yields of approximately 10%. The limited stability of the dihydrodipyrrin precluded study of the chlorin-forming process. We now have refined this methodology. A tetrahydrodipyrrin Western half (2,3,4,5-tetrahydro-1,3,3-trimethyldipyrrin) has been synthesized and found to be quite stable. The condensation of the Western half and an Eastern half (100 mM each) proceeded smoothly in CH(3)CN containing 100 mM TFA at room temperature for 30 min. The resulting linear tetrapyrrole, a 2,3,4,5-tetrahydrobilene-a, also is quite stable, enabling study of the conversion to chlorin. Refined conditions for the oxidative cyclization were found to include the following: the tetrahydrobilene-a (10 mM), AgTf (3-5 molar equiv), Zn(OAc)(2) (15 molar equiv), and 2,2,6,6-tetramethylpiperidine (15 molar equiv) in CH(3)CN at reflux exposed to air for 4-6 h, affording the zinc chlorin. The chlorin-forming process could be implemented in either a two-flask process or a one-flask process. The two-flask process was applied to form six zinc chlorins bearing substituents such as pentafluorophenyl, 3,5-di-tert-butylphenyl, TMS-ethyl benzoate, iodophenyl, or ethynylphenyl (deprotection of the TMS-ethynyl group occurred during the oxidative cyclization process). The stepwise yields (isolated) for the condensation and oxidative cyclization processes forming the tetrahydrobilene and zinc chlorin were 32-72% and 27-62%, respectively, giving overall yields of zinc chlorin from the Eastern and Western halves of 12-45%. Taken together, the refinements introduced enable 100-mg quantities of chlorin building blocks to be prepared in a facile and rational manner.


Assuntos
Porfirinas/química , Porfirinas/síntese química , Fotoquímica , Pigmentos Biológicos/síntese química , Pigmentos Biológicos/química , Análise Espectral , Zinco
2.
J Org Chem ; 66(22): 7402-19, 2001 Nov 02.
Artigo em Inglês | MEDLINE | ID: mdl-11681955

RESUMO

Two new cyclic hexameric arrays of porphyrins have been prepared in a rational, convergent manner. The porphyrins in each cyclic hexamer are joined by diphenylethyne linkers affording a wheel-like array with a diameter of approximately 35 A. One array is comprised of five zinc (Zn) porphyrins and one free base (Fb) porphyrin (cyclo-Zn(5)FbU) while the other is comprised of an alternating sequence of two Zn porphyrins and one Fb porphyrin (cyclo-Zn(2)FbZn(2)FbU). The prior synthesis employed a one-flask template-directed process and afforded alternating Zn and Fb porphyrins or all Zn porphyrins. More diverse metalation patterns are attractive for manipulating the flow of excited-state energy in the arrays. The rational synthesis of each array employed three Pd-mediated coupling reactions with four tetraarylporphyrin building blocks bearing diethynyl, diiodo, bromo/iodo, or iodo/ethynyl groups. The final ring closure yielding the cyclic hexamer was achieved by reaction of a porphyrin pentamer + porphyrin monomer or the joining of two porphyrin trimers. In the presence of a tripyridyl template, the yields of the 5 + 1 and 3 + 3 reactions ranged from 10 to 13%. The 5 + 1 reaction in the absence of the template proceeded in 3.5% yield, thereby establishing the structure-directed contribution to cyclic hexamer formation. The 3 + 3 route relied on successive ethyne + iodo/bromo coupling reactions. One template-directed route to cyclo-Zn(2)FbZn(2)FbU employed a magnesium porphyrin, affording cyclo-Zn(2)FbZn(2)MgU from which magnesium was selectively removed. The arrays exhibit absorption spectra that are nearly the sum of the spectra of the component parts, indicating weak electronic coupling. Fluorescence spectroscopy showed that the quantum yield of energy transfer in toluene at room temperature from the Zn porphyrins to the Fb porphyrin(s) was 60% in cyclo-Zn(5)FbU and 90% in cyclo-Zn(2)FbZn(2)FbU. Two dipyridyl-substituted porphyrins, a Zn tetraarylporphyrin and a Fb oxaporphyrin, have been synthesized for use as guests in the cyclic hexamers, affording self-assembled arrays for light-harvesting studies.

3.
Inorg Chem ; 40(18): 4762-74, 2001 Aug 27.
Artigo em Inglês | MEDLINE | ID: mdl-11511227

RESUMO

The use of lanthanide triple-decker sandwich molecules containing porphyrins and phthalocyanines in molecular information storage applications requires the ability to attach monomeric triple deckers or arrays of triple deckers to electroactive surfaces. Such applications are limited by existing methods for preparing triple deckers. The reaction of a lanthanide porphyrin half-sandwich complex ((Por)M(acac)) with a dilithium phthalocyanine (PcLi2) in refluxing 1,2,4-trichlorobenzene (bp 214 degrees C) affords a mixture of triple deckers of composition (Pc)M(Pc)M(Por), (Por)M(Pc)M(Por), and (Pc)M(Por)M(Pc). We have investigated more directed methods for preparing triple deckers of a given type with distinct metals in each layer. Application of the method of Weiss, which employs reaction of a (Por)M(acac) species with a lanthanide double decker in refluxing 1,2,4-trichlorobenzene, afforded the desired triple decker in some cases but a mixture of triple deckers in others. The approach we developed employs in situ formation of the lanthanide reagent EuCl[N(SiMe3)2]2 or CeI[N(SiMe3)2]2, which upon reaction with a porphyrin affords the half-sandwich complex (Por)EuX or (Por)CeX' (X = Cl, N(SiMe3)2; X' = I, N(SiMe3)2). Subsequent reaction with PcLi2 gives the double decker (Por)M(Pc). The (Por(1))EuX half-sandwich complex gave the desired triple decker upon reaction with (Pc)Eu(Pc) but little of the desired product upon reaction with (Por(2))Eu(Pc). The (Por(1))CeX' half-sandwich complex reacted with europium double deckers (e.g., (tBPc)Eu(Por(2)), (tBPc)2Eu) to give the triple deckers (Por(1))Ce(tBPc)Eu(Por(2)) and (Por(1))Ce(tBPc)Eu(tBPc) in a rational manner (tB = tetra-tert-butyl). The reactions yielding the half-sandwich, double-decker, and triple-decker complexes were performed in refluxing bis(2-methoxyethyl) ether (bp 162 degrees C). The porphyrins incorporated in the various triple deckers include meso-tetrapentylporphyrin, meso-tetra-p-tolylporphyrin, octaethylporphyrin, and meso-tetraarylporphyrins bearing iodo, ethynyl, or iodo and ethynyl substituents. The triple deckers bearing iodo and/or ethynyl substituents constitute useful building blocks for information storage applications.

4.
J Org Chem ; 65(23): 7919-29, 2000 Nov 17.
Artigo em Inglês | MEDLINE | ID: mdl-11073599

RESUMO

Chlorins bearing synthetic handles at specific sites about the perimeter of the macrocycle constitute valuable building blocks. We previously developed methodology for preparing meso-substituted chlorin building blocks and now present methodology for preparing several complementary beta-substituted chlorin building blocks. The chlorins bear one or two beta substituents, one meso substituent, a geminal dimethyl group to lock in the chlorin hydrogenation level, and no flanking meso and beta substituents. The synthesis involves convergent joining of an Eastern half and a Western half. New routes have been developed to two beta-substituted bromo-dipyrromethane monocarbinols (Eastern halves). A new beta-substituted Western half was prepared following the method for preparing an unsubstituted Western half (3,3-dimethyl-2,3-dihydrodipyrrin). Chlorin formation is achieved by a two-flask process of acid-catalyzed condensation followed by metal-mediated oxidative cyclization. beta-Substituted chlorins have been prepared in 18-24% yield bearing a 4-iodophenyl group at the 8-position, a 4-iodophenyl group or a 4-[2-(trimethylsilyl)ethynyl]phenyl group at the 12-position, and a 4-iodophenyl group and a 4-[2-(trimethylsilyl)ethynyl]phenyl group at diametrically opposed beta-positions (2, 12). The latter building block makes possible the stepwise construction of linear multi-chlorin architectures. The chlorins exhibit typical absorption and fluorescence spectra. A systematic shift in the absorption maximum (637-655 nm for the free base chlorins, 606-628 nm for the zinc chlorins) and intensity of the chlorin Q(y)() band (epsilon up to 79 000 M(-)(1) cm(-)(1)) is observed depending on the location of the substituents. The characteristic spectral features and location of substituents in defined positions make these chlorins well suited for a variety of applications in biomimetic and materials chemistry.


Assuntos
Porfirinas/síntese química , Fluorescência
5.
J Org Chem ; 65(22): 7323-44, 2000 Nov 03.
Artigo em Inglês | MEDLINE | ID: mdl-11076589

RESUMO

Porphyrins bearing specific patterns of substituents are crucial building blocks in biomimetic and materials chemistry. We have developed methodology that avoids statistical reactions, employs minimal chromatography, and affords up to gram quantities of regioisomerically pure porphyrins bearing predesignated patterns of up to four different meso substituents. The methodology is based upon the availability of multigram quantities of dipyrromethanes. A procedure for the diacylation of dipyrromethanes using EtMgBr and an acid chloride has been refined. A new procedure for the preparation of unsymmetrical diacyl dipyrromethanes has been developed that involves (1) monoacylation with EtMgBr and a pyridyl benzothioate followed by (2) introduction of the second acyl unit upon reaction with EtMgBr and an acid chloride. The scope of these acylation methods has been examined by preparing multigram quantities of diacyl dipyrromethanes bearing a variety of substituents. Reduction of the diacyl dipyrromethane to the corresponding dipyrromethane-dicarbinol is achieved with NaBH(4) in methanolic THF. Porphyrin formation involves the acid-catalyzed condensation of a dipyrromethane-dicarbinol and a dipyrromethane followed by oxidation with DDQ. Optimal conditions for the condensation were identified after examining various reaction parameters (solvent, temperature, acid, concentration, time). The conditions identified (2.5 mM reactants in acetonitrile containing 30 mM TFA at room temperature for <7 min) provided reaction without detectable scrambling (LD-MS) for aryl-substituted dipyrromethanes, and trace scrambling for alkyl-substituted dipyrromethanes. The desired porphyrins were obtained in 14-40% yield. The synthesis is compatible with diverse functionalities: amide, aldehyde, carboxylic acid, ester, nitrile, ether, bromo, iodo, ethyne, TMS-ethyne, TIPS-ethyne, perfluoroarene. In total 30 porphyrins of the types A(3)B, trans-A(2)B(2), trans-AB(2)C, cis-A(2)B(2), cis-A(2)BC, and ABCD were prepared, including >1-g quantities of three porphyrins.


Assuntos
Porfirinas/síntese química , Acilação , Catálise , Indicadores e Reagentes , Mimetismo Molecular , Porfirinas/química , Solventes , Temperatura
6.
Org Lett ; 2(17): 2563-6, 2000 Aug 24.
Artigo em Inglês | MEDLINE | ID: mdl-10990397

RESUMO

[reaction: see text]A shape-persistent cyclic array of six zinc porphyrins provides an effective host for a dipyridyl-substituted free base porphyrin, yielding a self-assembled structure for studies of light harvesting. Energy transfer occurs essentially quantitatively from uncoordinated to pyridyl-coordinated zinc porphyrins in the cyclic array. Energy transfer from the coordinated zinc porphyrin to the guest free base porphyrin is less efficient (phitrans approximately 40%) and is attributed to a Förster through-space process.


Assuntos
Porfirinas/química , Fenômenos Químicos , Físico-Química , Conformação Molecular , Espectrometria de Fluorescência , Zinco/química
7.
Org Lett ; 2(12): 1745-8, 2000 Jun 15.
Artigo em Inglês | MEDLINE | ID: mdl-10880216

RESUMO

[reaction: see text] Diverse Lewis acids and Bronsted acids were examined in the two-step, one-flask synthesis of meso-tetraphenylporphyrin, N-confused tetraphenylporphyrin, and tetraphenylsapphyrin. The scope of acid catalysis was found to be very broad, with 35 of 45 acids providing TPP in yields ranging from 5% to 58%. NC-TPP was also widely observed in yields of 1-40%, and TPS was infrequently observed in yields of <1%. Additionally, conditions were found for direct preparation of magnesium TPP and copper TPP.


Assuntos
Ácidos não Carboxílicos/química , Porfirinas/síntese química , Aldeídos/química , Catálise , Pirróis/química
8.
J Org Chem ; 65(4): 1084-92, 2000 Feb 25.
Artigo em Inglês | MEDLINE | ID: mdl-10814057

RESUMO

The condensation of an aldehyde with a dipyrromethane bearing a sterically unhindered aryl substituent at the 5-position typically results in low yield and a mixture of porphyrin products derived from acidolytic scrambling. We have developed a concise nonscrambling synthesis of such trans-porphyrins that takes advantage of the availability of multigram quantities of dipyrromethanes. This route involves the selective monoacylation of the dipyrromethanes with a pyridyl thioester, reduction of the monoacyl dipyrromethane to the corresponding carbinol, and self-condensation of the carbinol to form the porphyrin. The monoacylation procedure has wide scope as demonstrated by the preparation of a set of 15 diverse monoacyl dipyrromethanes in good yield at the multigram scale. The dipyrromethanecarbinol self-condensation reaction is extremely rapid (<3 min) under mild room-temperature conditions and affords the trans-porphyrin in 16-28% yield. Analysis by laser-desorption mass spectrometry (LD-MS) of samples from the crude reaction mixture revealed no scrambling within the limit of detection (1 part in 100). The self-condensation is compatible with a range of electron-withdrawing or -releasing substituents as well as substituents for building block applications (TMS-ethyne, ethyne, iodo, ester). The absence of any detectable scrambling in the self-condensation enables a simple purification. The synthesis readily affords gram quantities of pure, sterically unhindered trans-porphyrins in a process involving minimal chromatography.


Assuntos
Metano/análogos & derivados , Metano/síntese química , Porfirinas/síntese química , Pirróis/síntese química , Acilação , Espectroscopia de Ressonância Magnética , Metano/química , Metano/metabolismo , Estrutura Molecular , Porfirinas/química , Porfirinas/metabolismo , Pirróis/química , Pirróis/metabolismo , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz
9.
J Org Chem ; 65(10): 3160-72, 2000 May 19.
Artigo em Inglês | MEDLINE | ID: mdl-10814212

RESUMO

Chlorins provide the basis for plant photosynthesis, but synthetic model systems have generally employed porphyrins as surrogates due to the unavailability of suitable chlorin building blocks. We have adapted a route pioneered by Battersby to gain access to chlorins that bear two meso substituents, a geminal dimethyl group to lock in the chlorin hydrogenation level, and no flanking meso and beta substituents. The synthesis involves convergent joining of an Eastern half and a Western half. A 3,3-dimethyl-2,3-dihydrodipyrrin (Western half) was synthesized in four steps from pyrrole-2-carboxaldehyde. A bromodipyrromethane carbinol (Eastern half) was prepared by sequential acylation and bromination of a 5-substituted dipyrromethane followed by reduction. Chlorin formation is achieved by a two-flask process of acid-catalyzed condensation followed by metal-mediated oxidative cyclization. The latter reaction has heretofore been performed with copper templates. Investigation of conditions for this multistep process led to copper-free conditions (zinc acetate, AgIO(3), and piperidine in toluene at 80 degrees C for 2 h). The zinc chlorin was obtained in yields of approximately 10% and could be easily demetalated to give the corresponding free base chlorin. The synthetic process is compatible with a range of meso substituents (p-tolyl, mesityl, pentafluorophenyl, 4-[2-(trimethylsilyl)ethynyl]phenyl, 4-iodophenyl). Altogether four free base and four zinc chlorins have been prepared. The chlorins exhibit typical absorption spectra, fluorescence spectra, and fluorescence quantum yields. The ease of synthetic access, presence of appropriate substituents, and characteristic spectral features make these types of chlorins well suited for incorporation in synthetic model systems.


Assuntos
Porfirinas/síntese química , Indicadores e Reagentes , Espectroscopia de Ressonância Magnética , Plantas/química , Solventes , Espectrometria de Fluorescência , Espectrofotometria Ultravioleta
11.
Org Lett ; 1(9): 1455-8, 1999 Nov 04.
Artigo em Inglês | MEDLINE | ID: mdl-10825994

RESUMO

[formula: see text] N-Confused meso-substituted porphyrin is a porphyrin isomer previously available from one-flask porphyrin syntheses as a low-yield byproduct (< 7.5%). We have found that methanesulfonic acid catalyzed condensation of pyrrole and benzaldehyde followed by DDQ oxidation provides N-confused tetraphenylporphyrin (NC-TPP) in up to 39% yield in analytical scale experiments. Preparative synthesis provided an isolated yield of 35% (800 mg). This represents a > 5-fold yield improvement and makes significant quantities of NC-TPP readily available.


Assuntos
Porfirinas/síntese química , Cromatografia Líquida de Alta Pressão
12.
J Androl ; 19(1): 21-30, 1998.
Artigo em Inglês | MEDLINE | ID: mdl-9537288

RESUMO

Although the role of homeodomain transcription factors during embryogenesis is well known, their developmental function in postnatal animals is only beginning to be understood. We examined the regulation and expression pattern of Pem, a homeodomain protein that may regulate androgen-dependent events in the testis and epididymis. Immunohistochemical analysis showed that Pem protein is expressed selectively in the nuclei of Sertoli cells during the androgen-dependent stage of the seminiferous epithelium cycle in vivo. RNase protection analysis revealed that a proximal promoter was responsible for androgen-dependent mouse Pem expression in testis and epididymis in vivo, whereas a distal promoter was used in placenta. The mouse Pem gene was expressed at approximately 10-fold higher levels in the testis than in the epididymis; conversely, the rat Pem gene was expressed at >10-fold higher levels in the epididymis than in the testis. Because androgen-binding protein has been proposed to transport androgens from the testis to the epididymis, we tested whether the > or = 20-fold higher levels of androgen-binding protein expression in the rat, compared to that of mouse, are responsible for the differential expression of Pem in these two rodent species. Studies with androgen-binding protein transgenic mice demonstrated that the species-specific difference in androgen-binding protein expression is unlikely to be responsible for the species-specific difference in Pem expression. We found that androgen is necessary but not sufficient for Pem expression, since purified Sertoli cells rapidly down-regulated Pem transcripts in culture, regardless of the presence of testosterone. We conclude that Pem gene expression in Sertoli cells requires other cell types or cellular factors in addition to androgen.


Assuntos
Androgênios/fisiologia , Epididimo/metabolismo , Regulação da Expressão Gênica/fisiologia , Genes Homeobox , Proteínas de Homeodomínio/genética , Células de Sertoli/metabolismo , Fatores de Transcrição/genética , Proteína de Ligação a Androgênios/genética , Proteína de Ligação a Androgênios/metabolismo , Animais , Núcleo Celular/metabolismo , Células Cultivadas , Epididimo/citologia , Imuno-Histoquímica , Masculino , Camundongos , Regiões Promotoras Genéticas , Ratos , Ratos Sprague-Dawley
13.
Gene ; 185(2): 271-6, 1997 Feb 07.
Artigo em Inglês | MEDLINE | ID: mdl-9055826

RESUMO

Processed genes are generated by reverse transcription of mRNA and integration at a novel site in the genome and are typically transcriptionally silent. Here, we report that a processed gene on rat chromosome 4 that is highly related to the X chromosome-encoded rat Pem (r.Pem) homeobox gene is transcriptionally active. This processed gene, r.Pem2, is expressed at high levels in epididymis but not in any other tissues that express the r.Pem gene, including testis. Although r.Pem2, is expressed at high levels in epididymis but not in any other tissues that express the r.Pem gene, including testis. Although r.Pem2 lacks all the introns present in the r.Pem gene, it contains splice donor and acceptor sequences within the coding region, permitting it to be spliced and to potentially encode a 57 amino acid polypeptide. r.Pem2 transcripts accumulate in the caput and cauda regions of the epididymis but not in the initial segment. The r.Pem2 gene exhibits different regulation from the r.Pem gene; its expression is induced later during prepubertal development (between days 23 and 30 post partum) and independently of the presence of testosterone. Although the functional significance of r.Pem2 is unknown, its developmental regulation and its apparent acquisition of splicing sites during evolution are unique.


Assuntos
Proteínas de Ligação a DNA/genética , Epididimo/fisiologia , Regulação da Expressão Gênica no Desenvolvimento , Genes Homeobox , Proteínas de Homeodomínio , Splicing de RNA , Fatores de Transcrição/genética , Sequência de Aminoácidos , Animais , Proteínas de Ligação a DNA/biossíntese , Feminino , Gliceraldeído-3-Fosfato Desidrogenases/biossíntese , Gliceraldeído-3-Fosfato Desidrogenases/genética , Hipofisectomia , Masculino , Dados de Sequência Molecular , Especificidade de Órgãos , Reação em Cadeia da Polimerase/métodos , Processamento Pós-Transcricional do RNA , Ratos , Homologia de Sequência de Aminoácidos , Homologia de Sequência do Ácido Nucleico , Testículo/metabolismo , Testosterona/metabolismo , Distribuição Tecidual , Fatores de Transcrição/biossíntese , Transcrição Gênica
14.
Dev Biol ; 179(2): 471-84, 1996 Nov 01.
Artigo em Inglês | MEDLINE | ID: mdl-8903361

RESUMO

Few transcription factors in somatic cells of the testis and epididymis that could potentially regulate androgen-dependent developmental events during male gametogenesis have been identified. In this study we examined the regulation and expression of an orphan homeobox gene, Pem, which encodes a homeodomain related to those in the Prd/Pax gene family. RNase protection, in situ hybridization, and Northern blot analyses of wild-type and germ-cell-deficient mutant mice (W(V)/ W(V)) localized Pem transcripts to Sertoli cells of the testis. During prepubertal testicular development, Pem expression was dramatically induced on Day 9, approximately when germ cells are known to enter meiotic prophase. In adult mice, Pem transcripts were preferentially expressed in stages VII-VIII seminiferous epithelium, the androgen-dependent stages during which germ cells undergo the first step of meiosis. Pem gene expression depended on androgens and gonadotrophins, as demonstrated by a lack of expression in hypophysectomized mice, gonadotrophin-deficient hypogonadal (hpg) mutant mice, and androgen receptor-deficient (tfm) mutant mice. Injection of either testosterone or luteinizing hormone (LH) into hypophysectomized and hpg/hpg mice restored Pem expression in the testes to normal levels. The Pem gene was also shown to be specifically expressed in the proximal cauda and distal corpus regions of the epididymis, the regions where spermatozoa gain forward motility and fertilization competence. Pem expression in the epididymis did not depend on spermatozoa in the lumen of the testis, as shown in quaking (qk/qk) mutant mice, however, unlike in the testes, epididymal Pem expression required germ-cell-induced factors. Our results show that discrete cell types in male reproductive tissues transcribe and independently regulate the Pem homeobox gene. To our knowledge no transcription factors have previously been shown to depend on testosterone or LH for expression in Sertoli cells in vivo. Collectively, the data implicate Pem as a candidate to regulate a subset of androgen-dependent genes in the male reproductive system.


Assuntos
Proteínas de Ligação a DNA/genética , Epididimo/metabolismo , Regulação da Expressão Gênica , Genes Homeobox , Proteínas de Homeodomínio , Hormônio Luteinizante/metabolismo , Células de Sertoli/metabolismo , Testosterona/metabolismo , Fatores de Transcrição/genética , Animais , Hormônio Luteinizante/genética , Masculino , Camundongos , Camundongos Endogâmicos BALB C , Testosterona/genética
15.
Biol Reprod ; 55(5): 975-83, 1996 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-8902206

RESUMO

Homeobox genes encode DNA-binding proteins that regulate the transcription of subordinate downstream genes. In this study, we show that the Pem homeobox gene is expressed and regulated in a unique manner in neonatal and adult rats. Pem gene expression was primarily confined to reproductive tissue: epididymis, testis, ovary, and placenta. In the epididymis, Pem transcripts were localized by in situ hybridization analysis to the proximal cauda region, a site where spermatozoa gain fertilization competence. Pem mRNA levels dramatically increased between Days 21 and 26 postpartum in the epididymis, coincident with the induction of genes known to be responsive to testosterone (T), but in contrast to that of other genes examined, including the Hoxc-8 homeobox gene. Pem expression was shown to be T-dependent on the basis of an absence of Pem transcripts in the epididymides of hypophysectomized rats and restoration of normal Pem mRNA levels after administration of T. In the testis, Pem mRNA levels were elevated earlier (between Days 12 and 15 postpartum) and less dramatically than in epididymis. Pem gene expression in the testis was depressed after hypophysectomy, but normal levels of Pem expression were not restored by T treatment under the same conditions that permitted normal Pem expression in the epididymis. To our knowledge Pem is the first reported putative transcription factor that has been demonstrated to depend on androgens for expression in the epididymis, and thus Pem is a candidate as a regulator of androgen-dependent events in this tissue.


Assuntos
Androgênios/farmacologia , Proteínas de Ligação a DNA/genética , Epididimo/metabolismo , Regulação da Expressão Gênica/efeitos dos fármacos , Genes Homeobox/genética , Proteínas de Homeodomínio , Testículo/metabolismo , Fatores de Transcrição/genética , Animais , Implantes de Medicamento , Hipofisectomia , Masculino , RNA Mensageiro/metabolismo , Ratos , Ratos Sprague-Dawley , Testosterona/administração & dosagem , Testosterona/farmacologia
16.
J Biol Chem ; 271(29): 17536-46, 1996 Jul 19.
Artigo em Inglês | MEDLINE | ID: mdl-8663309

RESUMO

The Pem gene encodes an atypical homeodomain protein, distantly related to Prd/Pax family members, that we demonstrate is regulated in a complex transcriptional and post-transcriptional manner. We show that the rat Pem genomic structure includes three 5'-untranslated (5'-UT) exons and four coding exons, three of which encode the homeodomain. Several alternatively spliced transcripts were identified, including one that skips an internal coding exon, enabling this mRNA to express a novel form of the Pem protein. Other alternatively spliced mRNAs were characterized that possess different 5'-UT regions, including a muscle-specific transcript. The different 5'-UT termini present in Pem transcripts conferred different levels of translatability in vitro. Two promoters containing multiple transcription initiation sites were identified: a distal promoter (Pd) in the first 5'-UT exon and a proximal promoter (Pp) located in the "intron" upstream of the first coding exon. The Pd was active in placenta, ovary, tumor cell lines, and to a lesser extent in skeletal muscle. In contrast, transcripts from the Pp were only detectable in testis and epididymis and were only expressed in epididymis in the presence of testosterone. To our knowledge no transcription factors have previously been identified that exhibit androgen-dependent expression in the epididymis.


Assuntos
Processamento Alternativo , Proteínas de Ligação a DNA/biossíntese , Proteínas de Ligação a DNA/genética , Expressão Gênica/efeitos dos fármacos , Genes Homeobox , Proteínas de Homeodomínio , Regiões Promotoras Genéticas , Testosterona/farmacologia , Fatores de Transcrição/biossíntese , Fatores de Transcrição/genética , Transcrição Gênica , Animais , Sequência de Bases , Linhagem Celular , Sondas de DNA , Epididimo/metabolismo , Éxons , Feminino , Biblioteca Gênica , Íntrons , Masculino , Camundongos , Dados de Sequência Molecular , Especificidade de Órgãos , Ovário/metabolismo , Placenta/metabolismo , Gravidez , Biossíntese de Proteínas/efeitos dos fármacos , Ratos , Testículo/metabolismo
17.
Genomics ; 34(3): 304-16, 1996 Jun 15.
Artigo em Inglês | MEDLINE | ID: mdl-8786129

RESUMO

A hallmark of homeobox genes is their high degree of sequence conservation in distantly related species. Here, we report the chromosomal localization, sequence, and expression pattern of an orphan homeobox gene, Pem, that encodes a homeodomain (HD) that has undergone a surprisingly high rate of evolutionary change. The N-terminal portion of the Pem HD, which includes the first two alpha-helices, exhibits only 44% sequence identity between rat Pem (r.Pem) and mouse Pem (m.Pem). This N-terminal subdomain exhibited an extremely high frequency of nonsynonymous substitutions, severalfold higher than other regions of the Pem protein. In contrast, the third helix, which is known to confer most of the base-specific contacts of HDs with DNA, was almost identical in r. Pem and m.Pem. Several lines of evidence suggested that the rat and mouse genes that we identified as Pem genes are true homologues: (1) the r.Pem and m.Pem genes both reside on the X chromosome; (2) they possess identical exon/intron splice junctions; (3) they both encode a distinctive motif upstream of the HD that is unique to Pem; and (4) the only m.Pem-like gene we were able to identify in the rat genome other than r.Pem was a pseudogene, r.Pem-ps, whose sequence and chromosomal localization indicated that it was derived by reverse transcription and reinsertion into the genome. The functional r.Pem gene is selectively expressed in placenta, testis, epididymis, and ovary. This expression pattern is of interest since other genes transcribed in reproductive tissue have also been shown to undergo high rates of sequence divergence. The high rate of amino acid substitutions in the N-terminal region of the Pem HD suggests the possibility of species-specific directional selection.


Assuntos
Proteínas de Ligação a DNA/genética , Genes Homeobox , Proteínas de Homeodomínio , Pseudogenes , Fatores de Transcrição/genética , Cromossomo X , Processamento Alternativo , Sequência de Aminoácidos , Animais , Sequência de Bases , Linhagem Celular , Mapeamento Cromossômico , Clonagem Molecular , Sequência Consenso , Sequência Conservada , Primers do DNA , Proteínas de Ligação a DNA/biossíntese , Éxons , Genoma , Humanos , Íntrons , Camundongos , Camundongos Endogâmicos BALB C , Dados de Sequência Molecular , Reação em Cadeia da Polimerase , Ratos , Proteínas Recombinantes/biossíntese , Homologia de Sequência de Aminoácidos , Homologia de Sequência do Ácido Nucleico , Fatores de Transcrição/biossíntese
18.
Clin Chem ; 41(7): 1004-10, 1995 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-7600679

RESUMO

Advanced chemical workstations offer the potential to substantially improve the productivity of experimental research. To fully exploit such technologies, effective scheduling of experiments is crucial. Chemists tend to define experimental protocols with rigid time constraints, although often the scientific objectives can be achieved without adhering to such constraints. Investigation of a scheduling algorithm that allows flexible time constraints shows that improvements in workstation throughput as great as 50% can be reached by modest flexibility in the timing of operations in the experiments. Several heuristics that might be used with the scheduling algorithm were tested; a heuristic that schedules long experiments while first keeping the workstation busy was shown to be a good general choice.


Assuntos
Química Clínica/métodos , Laboratórios/organização & administração , Algoritmos , Autoanálise , Fatores de Tempo
19.
Photochem Photobiol ; 59(2): 145-51, 1994 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-8165233

RESUMO

A one flask synthesis of cis-substituted amphipathic porphyrins is reported. These porphyrins were used to study electrostatic effects on photoinduced electron transfer across the lipid bilayer-water interface. A neutral porphyrin undergoes only dynamic interfacial electron transfer reactions irrespective of charge of the acceptor, although ionic strength effects indicate a negative charge on the porphyrin donor species. A dianionic porphyrin forms an interfacial static complex with a dicationic electron acceptor, methyl viologen, at low ionic strength. The electron transfer rate within the complex is slow, 10(5) approximately 10(6) s-1, which is attributed to a near orthogonal orientation between the donor and the acceptor pi orbitals.


Assuntos
Porfirinas/síntese química , Porfirinas/efeitos da radiação , Eletroquímica , Transporte de Elétrons , Bicamadas Lipídicas/química , Fotoquímica , Porfirinas/química , Água/química
20.
Anal Chem ; 64(22): 2804-14, 1992 Nov 15.
Artigo em Inglês | MEDLINE | ID: mdl-1294007

RESUMO

252Cf plasma desorption mass spectrometry has been used in the characterization of more than 100 synthetic porphyrins ranging in mass from 614 u for tetraphenylporphyrin to over 2000 u for some porphyrin model systems. In virtually every case, 252Cf plasma desorption mass spectrometry yielded an intense ionized molecule ion [M.+ and/or (M+H)+], irrespective of the groups appended to the porphyrin. The appended groups include carboxylic acids, amides, imides, chloroacetamides, Fmoc-protected amino acids, aromatic amines, nitriles, alkynes, alkenes, esters, active esters, benzyl ethers, acetals, dithioacetals, ketones, imines, phenols, quinone, hydroquinone, ferrocene, cyanine dyes, trimethylsilyl protecting groups, nitro groups, and combinations of these functionalities. Metalloporphyrins and porphyrin-porphyrin dimers are also analyzed with ease. Resolved isotopic peaks were observed for porphyrins with molecular weights below 1000, and unresolved isotopic peaks yielding average masses were observed for porphyrin compounds with higher molecular weights. The limited resolution in the higher molecular weight range does not lessen the utility of the method because the observation of the molecule ions [M.+ and/or (M+H)+] provides unambiguous evidence concerning the success of the synthesis. The 252Cf plasma desorption mass spectra of porphyrins are not complicated by chemical transformations. This method is ideally suited for rapid analysis of synthetic porphyrins and provides a powerful tool for chemists engaged in the synthesis of complex organic molecules.


Assuntos
Califórnio/sangue , Porfirinas/síntese química , Espectrometria de Massas , Quinonas/síntese química
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